Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: SLC28A1 ENSSSCG00000002632

.

Description

solute carrier family 28 member 1 [Source:VGNC Symbol;Acc:VGNC:93041]

Location

Primary_assembly 7: 52,605,289-52,652,876 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064515.2	SLC28A1-201	2036	648aa	ENSSSCP00000033108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNF3 A0A8D0XXR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000078067.1	SLC28A1-205	4031	647aa	ENSSSCP00000068026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IVX3 A0A8D0XZV4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000002921.4	SLC28A1-203	2610	621aa	ENSSSCP00000002842.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LJD2 F1S6P5	-
ENSSSCT00000072967.1	SLC28A1-204	2603	607aa	ENSSSCP00000063249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYF6 A0A8D0IVD3	-
ENSSSCT00000085826.1	SLC28A1-202	1538	482aa	ENSSSCP00000064484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKH2 A0A8D0Q7N5	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data