Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: PRORP ENSSSCG00000001950

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Description

proteasome 20S subunit alpha 6 [Source:UniProtKB Gene Name;Acc:A0A8D1SDF5]

Location

Primary_assembly 7: 64,620,517-64,762,428 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000002182.5	PRORP-204	2518	583aa	ENSSSCP00000002131.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480Y4Z5 A0A4X1TA09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000066254.3	PRORP-202	2400	547aa	ENSSSCP00000055393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BGC1 A0A8D1SDF5	-
ENSSSCT00000040635.3	PRORP-201	2189	567aa	ENSSSCP00000047877.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AVI5 A0A4X1TA29	-
ENSSSCT00000090973.2	PRORP-203	1743	385aa	ENSSSCP00000070414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RGP7 A0A8D0TB20	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data