Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: ATF6B ENSSSCG00000001430

.

Description

activating transcription factor 6 beta [Source:VGNC Symbol;Acc:VGNC:85610]

Location

Primary_assembly 7: 24,153,574-24,171,718 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 11 transcripts (splice variants), 187 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000107903.1	ATF6B-201	5971	779aa	ENSSSCP00000082279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WZN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000107907.1	ATF6B-205	3642	646aa	ENSSSCP00000082283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000107909.1	ATF6B-207	2637	717aa	ENSSSCP00000082285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000036323.5	ATF6B-209	2570	698aa	ENSSSCP00000030892.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1REN3 K7GSK5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107910.1	ATF6B-208	2452	654aa	ENSSSCP00000082286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AVV2 A0A8D1LTQ1	-
ENSSSCT00000107906.1	ATF6B-204	2432	638aa	ENSSSCP00000082282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1F3N9 A0A8D1REF6	-
ENSSSCT00000107908.1	ATF6B-206	2080	637aa	ENSSSCP00000082284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000107904.1	ATF6B-202	4310	62aa	ENSSSCP00000082280.1	Nonsense mediated decay	-	-
ENSSSCT00000107905.1	ATF6B-203	2739	62aa	ENSSSCP00000082281.1	Nonsense mediated decay	-	-
ENSSSCT00000107911.1	ATF6B-210	2669	62aa	ENSSSCP00000082287.1	Nonsense mediated decay	-	-
ENSSSCT00000107912.1	ATF6B-211	2613	62aa	ENSSSCP00000082288.1	Nonsense mediated decay	-	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data