Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SEPTIN3 ENSSSCG00000000040

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Description

septin 3 [Source:VGNC Symbol;Acc:VGNC:92722]

Location

Primary_assembly 5: 6,623,265-6,660,702 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 9 transcripts (splice variants), 198 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000082407.2	SEPTIN3-206	3900	809aa	ENSSSCP00000059749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QCJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000069730.2	SEPTIN3-205	4761	350aa	ENSSSCP00000070447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8J7 A0A8D1RMP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000104732.1	SEPTIN3-203	4516	352aa	ENSSSCP00000074921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1Y408 A0A8W4F9F5	-
ENSSSCT00000076217.2	SEPTIN3-207	2605	801aa	ENSSSCP00000063209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYB7	-
ENSSSCT00000093163.1	SEPTIN3-208	2563	787aa	ENSSSCP00000079214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJ04	-
ENSSSCT00000049671.3	SEPTIN3-209	2225	407aa	ENSSSCP00000056057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BHJ1	-
ENSSSCT00000040807.3	SEPTIN3-202	2159	295aa	ENSSSCP00000059038.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRG9	-
ENSSSCT00000087040.2	SEPTIN3-204	2156	294aa	ENSSSCP00000066680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W4Z0 A0A5G2QPP7	-
ENSSSCT00000000042.5	SEPTIN3-201	1266	355aa	ENSSSCP00000000042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SJQ3	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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