Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC16B ENSSSCG00000039332

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Description

SEC16 homolog B, endoplasmic reticulum export factor [Source:VGNC Symbol;Acc:VGNC:92672]

Location

Primary_assembly 9: 119,778,664-119,842,922 reverse strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 3 transcripts (splice variants), 169 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000104794.1	SEC16B-201	4620	1022aa	ENSSSCP00000075888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F920	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000040084.3	SEC16B-203	4811	1021aa	ENSSSCP00000036260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZXB1	-
ENSSSCT00000063579.3	SEC16B-202	4211	961aa	ENSSSCP00000037697.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1R4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data