Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ESR1 ENSSSCG00000025777

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Description

estrogen receptor 1 [Source:VGNC Symbol;Acc:VGNC:103089]

Location

Primary_assembly 1: 14,217,036-14,493,363 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000035147.2	ESR1-205	6219	595aa	ENSSSCP00000030835.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29040	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000063430.2	ESR1-202	6195	587aa	ENSSSCP00000039928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6HFY3	-
ENSSSCT00000079800.1	ESR1-204	5303	334aa	ENSSSCP00000074152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VLM6 A0A5G2RAX2	-
ENSSSCT00000024477.3	ESR1-203	3533	574aa	ENSSSCP00000026750.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S8LAU6 A0A8D1VM21	-
ENSSSCT00000004517.6	ESR1-201	786	152aa	ENSSSCP00000004415.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A288CG40 A0A4X1VQR4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data