Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PSME3 ENSSSCG00000017385

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Description

proteasome activator subunit 3 [Source:VGNC Symbol;Acc:VGNC:91926]

Location

Primary_assembly 12: 20,028,112-20,035,557 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 5 transcripts (splice variants), 250 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000078981.2	PSME3-201	1113	265aa	ENSSSCP00000071458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TXU2 A0A8D0IIT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000018924.5	PSME3-205	3050	233aa	ENSSSCP00000018419.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1X9E3 A0A8D2BJV6	-
ENSSSCT00000041498.3	PSME3-204	2562	243aa	ENSSSCP00000047936.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A900QFT4	-
ENSSSCT00000083280.2	PSME3-202	1024	231aa	ENSSSCP00000074498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TXS8 A0A8D1DZT9	-
ENSSSCT00000068269.2	PSME3-203	925	198aa	ENSSSCP00000073175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TST4 A0A8D0UD37	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data