Gene: WDR17 ENSSSCG00000015766

Description

WD repeat domain 17 [Source:VGNC Symbol;Acc:VGNC:95816]

Location

Primary_assembly 15: 38,589,633-38,706,214 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017167.4	WDR17-201	4827	1322aa	ENSSSCP00000016706.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HUQ6 F1RT31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000051513.2	WDR17-202	4782	1307aa	ENSSSCP00000041799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AD33 A0A4X1VYY3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000039829.2	WDR17-203	4626	1255aa	ENSSSCP00000045255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMI6 A0A4X1VWQ6	-
ENSSSCT00000061858.2	WDR17-204	4530	1223aa	ENSSSCP00000049820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B089 A0A4X1VS96	-
ENSSSCT00000047965.2	WDR17-205	4299	1146aa	ENSSSCP00000032634.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZME6	-

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: WDR17 ENSSSCG00000015766

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Gene: WDR17 ENSSSCG00000015766

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