Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SH3KBP1 ENSSSCG00000012160

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Description

SH3 domain containing kinase binding protein 1 [Source:VGNC Symbol;Acc:VGNC:92828]

Location

Primary_assembly X: 15,885,069-16,224,183 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 8 transcripts (splice variants), 209 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000062905.3	SH3KBP1-204	4635	724aa	ENSSSCP00000037278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A000	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000013301.6	SH3KBP1-208	5327	649aa	ENSSSCP00000012945.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0TC05 F1SQN7	-
ENSSSCT00000078861.1	SH3KBP1-207	4984	665aa	ENSSSCP00000062992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481CIL9 A0A4X1V3J1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000035066.4	SH3KBP1-206	4821	667aa	ENSSSCP00000028253.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GK80	-
ENSSSCT00000056772.3	SH3KBP1-205	4716	656aa	ENSSSCP00000045887.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APR6	-
ENSSSCT00000064660.3	SH3KBP1-202	4454	628aa	ENSSSCP00000051789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480QB06 A0A8D0TNF7	-
ENSSSCT00000036455.4	SH3KBP1-203	3082	686aa	ENSSSCP00000029363.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GNB1	-
ENSSSCT00000036429.4	SH3KBP1-201	3059	648aa	ENSSSCP00000029213.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V6Q7 K7GMW4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data