Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: HRH1 ENSSSCG00000011576

.

Description

histamine receptor H1 [Source:VGNC Symbol;Acc:VGNC:88973]

Location

Primary_assembly 13: 67,209,127-67,411,170 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants), 186 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056672.3	HRH1-201	3185	504aa	ENSSSCP00000033895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZR00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000076265.1	HRH1-204	3280	485aa	ENSSSCP00000071624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JS47 F1SQA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000065990.3	HRH1-202	3199	485aa	ENSSSCP00000040652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JS47 F1SQA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087225.2	HRH1-205	2966	485aa	ENSSSCP00000066334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JS47 F1SQA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000012668.4	HRH1-203	2813	485aa	ENSSSCP00000012335.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JS47 F1SQA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data