Gene: SH3PXD2A ENSSSCG00000010604

Description

SH3 and PX domains 2A [Source:VGNC Symbol;Acc:VGNC:92829]

Location

Primary_assembly 14: 114,519,928-114,777,238 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 7 transcripts (splice variants), 267 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047287.3	SH3PXD2A-206	6818	1133aa	ENSSSCP00000036094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWS2 A0A8D1U0R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000060477.3	SH3PXD2A-207	6773	1118aa	ENSSSCP00000058615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BR24 A0A8D1N2A8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000059472.3	SH3PXD2A-204	6522	1105aa	ENSSSCP00000034085.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZR39	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000064354.3	SH3PXD2A-205	6480	1091aa	ENSSSCP00000039088.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A568 A0A8D0UAM9	-
ENSSSCT00000083079.2	SH3PXD2A-201	6355	1000aa	ENSSSCP00000071528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480Y2T9 A0A8D1MXB2	-
ENSSSCT00000086483.1	SH3PXD2A-203	6326	1119aa	ENSSSCP00000063216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEU0 A0A8D1QE66	-
ENSSSCT00000063492.3	SH3PXD2A-202	6290	1030aa	ENSSSCP00000040439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8X0 A0A8D0VIB6	-

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: SH3PXD2A ENSSSCG00000010604

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Gene: SH3PXD2A ENSSSCG00000010604

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