Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC3A1 ENSSSCG00000008449

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Description

solute carrier family 3 member 1 [Source:NCBI gene (formerly Entrezgene);Acc:100144588]

Location

Primary_assembly 3: 96,157,380-96,215,454 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 2 transcripts (splice variants), 219 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009251.4	SLC3A1-201	2646	680aa	ENSSSCP00000009017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S5K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000071035.1	SLC3A1-202	2568	654aa	ENSSSCP00000067975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSR8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data