Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: ZC3H14 ENSSSCG00000002426

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Description

zinc finger CCCH-type containing 14 [Source:VGNC Symbol;Acc:VGNC:95094]

Location

Primary_assembly 7: 110,463,517-110,513,257 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 7 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000058109.2	ZC3H14-204	5638	736aa	ENSSSCP00000054038.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BD48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000038157.3	ZC3H14-207	5846	711aa	ENSSSCP00000045787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AP46	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000042842.2	ZC3H14-206	5041	579aa	ENSSSCP00000052477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B8R9 A0A4X1SXD7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000041602.3	ZC3H14-201	4727	309aa	ENSSSCP00000042152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AE38	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000002695.5	ZC3H14-205	2784	605aa	ENSSSCP00000002626.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SDY8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000052011.3	ZC3H14-202	2313	727aa	ENSSSCP00000055143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1DEM6 A0A8D1YW49	-
ENSSSCT00000102883.1	ZC3H14-203	2299	691aa	ENSSSCP00000079049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FL71	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data