Gene: SRPK1 ENSSSCG00000001554

Description

SRSF protein kinase 1 [Source:VGNC Symbol;Acc:VGNC:93462]

Location

Primary_assembly 7: 31,645,755-31,701,087 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 7 transcripts (splice variants), 227 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001732.4	SRPK1-203	3497	831aa	ENSSSCP00000001688.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PW60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000058591.3	SRPK1-205	4648	795aa	ENSSSCP00000034739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTD5	-
ENSSSCT00000039757.3	SRPK1-202	4294	590aa	ENSSSCP00000035934.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWV2 A0A8D1X126	-
ENSSSCT00000056511.1	SRPK1-204	4283	686aa	ENSSSCP00000048767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AX92 A0A4X1SWL5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000062109.2	SRPK1-207	4233	624aa	ENSSSCP00000038492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A409 A0A4X1SXS0	-
ENSSSCT00000049454.2	SRPK1-201	4192	667aa	ENSSSCP00000039294.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1U1B3 A0A8D1YLL9	-
ENSSSCT00000059532.3	SRPK1-206	4041	590aa	ENSSSCP00000058246.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BP05 A0A8D1J673	-

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: SRPK1 ENSSSCG00000001554

Breeds

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Gene: SRPK1 ENSSSCG00000001554

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