Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM26 ENSSSCG00000001233

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Description

tripartite motif containing 26 [Source:NCBI gene (formerly Entrezgene);Acc:100144460]

Gene Synonyms

afp, znf173

Location

Primary_assembly 7: 22,756,341-22,780,259 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 3 transcripts (splice variants), 146 orthologues and 75 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000074988.3	TRIM26-202	3293	544aa	ENSSSCP00000060799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q9Z7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107562.1	TRIM26-203	3257	533aa	ENSSSCP00000081953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000036524.5	TRIM26-201	2450	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data