Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATF7 ENSSSCG00000000278

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Description

activating transcription factor 7 [Source:VGNC Symbol;Acc:VGNC:112532]

Location

Primary_assembly 5: 18,728,694-18,838,542 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 4 transcripts (splice variants), 324 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042399.2	ATF7-204	6590	494aa	ENSSSCP00000037350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0S2 A0A8D1W551	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000023450.4	ATF7-203	6545	451aa	ENSSSCP00000020078.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L7S1	-
ENSSSCT00000000299.5	ATF7-202	2068	442aa	ENSSSCP00000000294.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SFP0	-
ENSSSCT00000070084.2	ATF7-201	649	117aa	ENSSSCP00000065085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WAN1 A0A5G2QM30	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data