Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cpsf1 ENSSMAG00000020547

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Description

cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]

Location

Primary_assembly 7: 24,706,058-24,723,058 forward strand.

ASM1334776v1:CM023549.1

About this gene

This gene has 9 transcripts (splice variants), 200 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSMAT00000080038.1	cpsf1-204	4476	1491aa	ENSSMAP00000057724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3DDW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000034016.2	cpsf1-201	4610	1444aa	ENSSMAP00000033591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3BFY4	-
ENSSMAT00000042891.1	cpsf1-202	4574	1432aa	ENSSMAP00000039155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3BVU7	-
ENSSMAT00000068709.1	cpsf1-205	4308	1435aa	ENSSMAP00000054859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3D5Q0	-
ENSSMAT00000056301.1	cpsf1-206	4302	1433aa	ENSSMAP00000041578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3C2S0	-
ENSSMAT00000046858.1	cpsf1-207	4149	1382aa	ENSSMAP00000058384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3DFS5	-
ENSSMAT00000079462.1	cpsf1-208	3735	1244aa	ENSSMAP00000065605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3E1E6	-
ENSSMAT00000065508.1	cpsf1-203	1170	389aa	ENSSMAP00000050256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CSJ8	-
ENSSMAT00000064237.1	cpsf1-209	600	199aa	ENSSMAP00000052662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CZF4	-

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Summary

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