Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cntn3a.1 ENSSMAG00000017036

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Description

contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]

Location

Primary_assembly 11: 11,126,062-11,184,207 reverse strand.

ASM1334776v1:CM023553.1

About this gene

This gene has 9 transcripts (splice variants), 64 orthologues and 60 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSMAT00000074889.1	cntn3a.1-207	3200	1036aa	ENSSMAP00000063918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3DWK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000064971.1	cntn3a.1-201	3406	1029aa	ENSSMAP00000036525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3BNB7	-
ENSSMAT00000050897.1	cntn3a.1-203	3146	972aa	ENSSMAP00000035343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3BJY5	-
ENSSMAT00000044557.1	cntn3a.1-208	3108	1035aa	ENSSMAP00000044603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CBE5	-
ENSSMAT00000072100.1	cntn3a.1-202	3093	1030aa	ENSSMAP00000051480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CW22	-
ENSSMAT00000065252.1	cntn3a.1-206	3066	1021aa	ENSSMAP00000052851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CZZ3	-
ENSSMAT00000028194.2	cntn3a.1-204	3036	1011aa	ENSSMAP00000027847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3B3E2	-
ENSSMAT00000062298.1	cntn3a.1-205	3030	1009aa	ENSSMAP00000048190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CLN2	-
ENSSMAT00000062811.1	cntn3a.1-209	3006	1001aa	ENSSMAP00000053012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3D0F4	-

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Summary

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