Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smg5 ENSSMAG00000013059

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Description

SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]

Location

Primary_assembly 16: 16,169,313-16,187,639 reverse strand.

ASM1334776v1:CM023558.1

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSMAT00000021626.2	smg5-201	5106	1121aa	ENSSMAP00000021374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U9CIQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000021663.2	smg5-202	5016	1091aa	ENSSMAP00000021408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSMAT00000048244.1	smg5-203	5001	1086aa	ENSSMAP00000051721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSMAT00000056832.1	smg5-204	4839	1035aa	ENSSMAP00000070389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSMAT00000042773.1	smg5-205	4743	1000aa	ENSSMAP00000051400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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