Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: upf3b ENSSMAG00000012913

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Description

UPF3B regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]

Location

Primary_assembly 13: 8,701,350-8,704,239 reverse strand.

ASM1334776v1:CM023555.1

About this gene

This gene has 6 transcripts (splice variants), 216 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSMAT00000021334.2	upf3b-202	1401	466aa	ENSSMAP00000021082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3ANR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000076030.1	upf3b-201	1347	448aa	ENSSMAP00000046401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3CGJ3	-
ENSSMAT00000063703.1	upf3b-203	1341	446aa	ENSSMAP00000043475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3C867	-
ENSSMAT00000059389.1	upf3b-204	1284	427aa	ENSSMAP00000059447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3DIT8	-
ENSSMAT00000047933.1	upf3b-205	1179	392aa	ENSSMAP00000062645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3DSY6	-
ENSSMAT00000021358.2	upf3b-206	948	315aa	ENSSMAP00000021106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D3ANT2	-

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Summary

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