Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: shmt2 ENSSMAG00000012014

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Description

serine hydroxymethyltransferase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-071213-1]

Location

Primary_assembly 6: 8,777,053-8,797,149 reverse strand.

ASM1334776v1:CM023548.1

About this gene

This gene has 10 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSSMAT00000044239.1	shmt2-202	1867	505aa	ENSSMAP00000068101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000019831.2	shmt2-201	1855	501aa	ENSSMAP00000019589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000070881.1	shmt2-205	1849	499aa	ENSSMAP00000064938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000065332.1	shmt2-203	1846	498aa	ENSSMAP00000044576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000068933.1	shmt2-204	1837	495aa	ENSSMAP00000064658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000066321.1	shmt2-206	1834	494aa	ENSSMAP00000054568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000080656.1	shmt2-208	1825	491aa	ENSSMAP00000042563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000076015.1	shmt2-207	1786	478aa	ENSSMAP00000070592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000057238.1	shmt2-209	1699	449aa	ENSSMAP00000038974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000055160.1	shmt2-210	672	64aa	ENSSMAP00000052164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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