Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: capn1 ENSSMAG00000004016

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Description

calpain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2814]

Location

Primary_assembly 2: 3,444,513-3,460,244 reverse strand.

ASM1334776v1:CM023544.1

About this gene

This gene has 10 transcripts (splice variants), 205 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSSMAT00000006632.2	capn1-208	2513	725aa	ENSSMAP00000006549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSMAT00000077545.1	capn1-202	3643	706aa	ENSSMAP00000057944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000074441.1	capn1-203	3631	702aa	ENSSMAP00000053166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000051929.1	capn1-204	3616	697aa	ENSSMAP00000043710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000039767.1	capn1-205	3565	680aa	ENSSMAP00000042921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000052541.1	capn1-206	3514	663aa	ENSSMAP00000067551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000056606.1	capn1-207	3433	636aa	ENSSMAP00000069384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000078406.1	capn1-201	3314	708aa	ENSSMAP00000044670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000068097.1	capn1-209	2459	707aa	ENSSMAP00000047962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSMAT00000006662.2	capn1-210	2405	689aa	ENSSMAP00000006580.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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