Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: xrn1 ENSSFOG00015024211

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Description

5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]

Location

Primary_assembly 25: 18,983,283-18,996,067 reverse strand.

fSclFor1.1:LR584090.1

About this gene

This gene has 7 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSSFOT00015038467.2	xrn1-201	4926	1641aa	ENSSFOP00015038048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSFOT00015047786.1	xrn1-202	4902	1633aa	ENSSFOP00015065918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSFOT00015044869.1	xrn1-204	4779	1592aa	ENSSFOP00015060016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSFOT00015046180.1	xrn1-205	4737	1578aa	ENSSFOP00015066756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSFOT00015072013.1	xrn1-203	4632	1543aa	ENSSFOP00015067360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSFOT00015055603.1	xrn1-206	2943	980aa	ENSSFOP00015044728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSFOT00015045934.1	xrn1-207	1533	510aa	ENSSFOP00015054577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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