Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: synj1 ENSSFOG00015006095

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Description

synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]

Location

Primary_assembly 4: 23,605,862-23,632,139 reverse strand.

fSclFor1.1:LR584069.1

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSFOT00015009547.2	synj1-202	4877	1568aa	ENSSFOP00015009419.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9V0I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSFOT00015009500.2	synj1-203	4838	1555aa	ENSSFOP00015009372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9RC11	-
ENSSFOT00015065811.1	synj1-204	4382	1403aa	ENSSFOP00015066675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9VZ70	-
ENSSFOT00015046616.1	synj1-205	4368	1455aa	ENSSFOP00015074006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WIY2	-
ENSSFOT00015054244.1	synj1-201	4208	1345aa	ENSSFOP00015063572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9VQS6	-
ENSSFOT00015071622.1	synj1-206	4145	1324aa	ENSSFOP00015077770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0CMP7	-
ENSSFOT00015052798.1	synj1-207	4055	1294aa	ENSSFOP00015057005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9VIB7	-
ENSSFOT00015076182.1	synj1-208	3278	1035aa	ENSSFOP00015040155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9SQW0	-
ENSSFOT00015067418.1	synj1-209	3081	1026aa	ENSSFOP00015053829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9TZG4	-
ENSSFOT00015052352.1	synj1-210	2844	947aa	ENSSFOP00015071687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WC59	-

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Summary

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