Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cpsf1 ENSSFOG00015004606

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Description

cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]

Location

Primary_assembly 23: 15,802,171-15,816,775 reverse strand.

fSclFor1.1:LR584088.1

About this gene

This gene has 9 transcripts (splice variants), 200 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSFOT00015042272.1	cpsf1-202	4816	1477aa	ENSSFOP00015046287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9T4Y5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSFOT00015007235.2	cpsf1-201	4961	1372aa	ENSSFOP00015007125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9QYJ7	-
ENSSFOT00015073503.1	cpsf1-203	4765	1460aa	ENSSFOP00015069663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9W6X9	-
ENSSFOT00015050125.1	cpsf1-204	4690	1435aa	ENSSFOP00015044413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9T357	-
ENSSFOT00015056820.1	cpsf1-205	4550	1451aa	ENSSFOP00015069586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0CIQ8	-
ENSSFOT00015068413.1	cpsf1-206	4484	1429aa	ENSSFOP00015038923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9SG82	-
ENSSFOT00015048978.1	cpsf1-207	4325	1376aa	ENSSFOP00015053260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9TK81	-
ENSSFOT00015007293.2	cpsf1-208	4281	1426aa	ENSSFOP00015007183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9R7Q1	-
ENSSFOT00015074067.1	cpsf1-209	3714	1237aa	ENSSFOP00015066052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9VXG7	-

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Summary

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