Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNJ1 ENSSHAG00000008538

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Description

synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]

Location

Primary_assembly 3: 244,973,473-245,091,443 forward strand.

mSarHar1.11:LR735556.1

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSHAT00000009947.2	SYNJ1-201	7355	1569aa	ENSSHAP00000009860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3W355	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSHAT00000048198.1	SYNJ1-202	7340	1564aa	ENSSHAP00000042101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PTI6	-
ENSSHAT00000028613.1	SYNJ1-205	7261	1556aa	ENSSHAP00000044212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PXZ4	-
ENSSHAT00000026664.1	SYNJ1-203	7229	1527aa	ENSSHAP00000038306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PJ74	-
ENSSHAT00000009946.2	SYNJ1-204	4829	1314aa	ENSSHAP00000009859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3W354	-

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Summary

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