Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: VPS39 ENSSHAG00000005115

.

Description

VPS39 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:20593]

Location

Primary_assembly 2: 263,583,555-263,680,689 reverse strand.

mSarHar1.11:LR735555.1

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSHAT00000005916.2	VPS39-201	9641	886aa	ENSSHAP00000005862.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3VRQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSHAT00000005917.2	VPS39-202	9608	875aa	ENSSHAP00000005863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3VRQ8	-

.

Summary

.

.