Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALCOCO1 ENSSHAG00000004757

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Description

calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:29306]

Location

Primary_assembly 5: 88,457,567-88,490,228 forward strand.

mSarHar1.11:LR735558.1

About this gene

This gene has 4 transcripts (splice variants), 251 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSHAT00000005500.2	CALCOCO1-204	3089	734aa	ENSSHAP00000005446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3VQJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSHAT00000035988.1	CALCOCO1-202	3181	713aa	ENSSHAP00000044280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PVX5	-
ENSSHAT00000039984.1	CALCOCO1-203	3158	712aa	ENSSHAP00000036003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PEW6	-
ENSSHAT00000048214.1	CALCOCO1-201	2462	655aa	ENSSHAP00000032466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4V1K6	-

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Summary

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