Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF39 ENSSHAG00000004414

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Description

pre-mRNA processing factor 39 [Source:HGNC Symbol;Acc:HGNC:20314]

Location

Primary_assembly 2: 311,761,709-311,799,452 reverse strand.

mSarHar1.11:LR735555.1

About this gene

This gene has 4 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSHAT00000047415.1	PRPF39-201	2863	613aa	ENSSHAP00000025111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4NM69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSHAT00000044379.1	PRPF39-202	2990	548aa	ENSSHAP00000039076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PKQ7	-
ENSSHAT00000029185.1	PRPF39-204	2693	184aa	ENSSHAP00000032806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4P4D6	-
ENSSHAT00000005093.2	PRPF39-203	2468	155aa	ENSSHAP00000005044.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3VPD9	-

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Summary

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