Transcript: ENSRNOT00000060461.5 Pcdhgb7-201

Description

protocadherin gamma subfamily B, 7 [Source:RGD Symbol;Acc:1588516]

Location

About this transcript

This transcript has 6 exons, is annotated with 64 domains and features, is associated with 355 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101310.2	Pcdhgb7-202	5059	1033aa	ENSRNOP00000078422.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6JUM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000121581.1	Pcdhgb7-203	10235	871aa	ENSRNOP00000111317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000060461.5	Pcdhgb7-201	4764	929aa	ENSRNOP00000057205.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQQ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000136693.1	Pcdhgb7-204	2923	904aa	ENSRNOP00000103533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,764 bps, Translation length: 929 residues

Version

ENSRNOT00000060461.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.