Transcript: ENSRNOT00000086539.3 Dnajc6-202

Description

DnaJ heat shock protein family (Hsp40) member C6 [Source:RGD Symbol;Acc:1309900]

Gene Synonyms

LOC313409

Location

Primary_assembly 5: 121,246,010-121,398,747 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 31 domains and features, is associated with 474 variant alleles and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000052887.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113921.2	Dnajc6-204	5509	968aa	ENSRNOP00000095523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000130808.1	Dnajc6-206	5292	949aa	ENSRNOP00000109452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000110252.2	Dnajc6-203	5261	912aa	ENSRNOP00000086865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6P4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000116178.2	Dnajc6-205	5201	900aa	ENSRNOP00000084012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWX0	-
ENSRNOT00000086259.3	Dnajc6-201	5139	938aa	ENSRNOP00000070493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JY26	-
ENSRNOT00000086539.3	Dnajc6-202	5058	911aa	ENSRNOP00000070257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JRN8 D4A0I5	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 5,058 bps, Translation length: 911 residues

Version

ENSRNOT00000086539.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000086539.3 Dnajc6-202

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Transcript: ENSRNOT00000086539.3 Dnajc6-202

Summary

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