Transcript: ENSRNOT00000083017.3 Herc4-201

Description

HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:RGD Symbol;Acc:1310971]

Gene Synonyms

LOC309758

Location

About this transcript

This transcript has 26 exons, is annotated with 42 domains and features, is associated with 107 variant alleles and maps to 251 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083017.3	Herc4-201	3880	1016aa	ENSRNOP00000072219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107240.2	Herc4-202	3249	987aa	ENSRNOP00000082108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWE9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 26, Coding exons: 24, Transcript length: 3,880 bps, Translation length: 1,016 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PQN1

Version

ENSRNOT00000083017.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.