Transcript: ENSRNOT00000067677.5 Kdm6b-201

Description

lysine demethylase 6B [Source:RGD Symbol;Acc:1307629]

Gene Synonyms

Jmjd3, LOC363630

Location

About this transcript

This transcript has 21 exons, is annotated with 62 domains and features, is associated with 22 variant alleles and maps to 425 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116399.2	Kdm6b-202	6454	1635aa	ENSRNOP00000091469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000067677.5	Kdm6b-201	6256	1569aa	ENSRNOP00000060247.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V9U4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 6,256 bps, Translation length: 1,569 residues

Version

ENSRNOT00000067677.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.