Transcript: ENSRNOT00000055970.6 Chd4-201

Description

chromodomain helicase DNA binding protein 4 [Source:RGD Symbol;Acc:620064]

Gene Synonyms

LOC312712, Mi-2

Location

About this transcript

This transcript has 40 exons, is annotated with 87 domains and features, is associated with 56 variant alleles and maps to 391 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055970.6	Chd4-201	6700	1928aa	ENSRNOP00000052823.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PU01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107359.2	Chd4-202	6006	1895aa	ENSRNOP00000091626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACF8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 40, Coding exons: 39, Transcript length: 6,700 bps, Translation length: 1,928 residues

Version

ENSRNOT00000055970.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.