Transcript: ENSRNOT00000042750.7 Itsn1-201

Description

intersectin 1 [Source:RGD Symbol;Acc:2935]

Gene Synonyms

EHSH1, Itsn, LOC100911851

Location

Primary_assembly 11: 44,513,186-44,602,170 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 69 domains and features, is associated with 357 variant alleles and maps to 295 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000002001.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096792.2	Itsn1-204	12973	1718aa	ENSRNOP00000095645.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WVE9-3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114620.2	Itsn1-206	12896	1703aa	ENSRNOP00000077439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9J0	-
ENSRNOT00000110949.2	Itsn1-205	8624	279aa	ENSRNOP00000089593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7M7	-
ENSRNOT00000096706.2	Itsn1-203	5516	1718aa	ENSRNOP00000097531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARZ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000042750.7	Itsn1-201	5112	1217aa	ENSRNOP00000044773.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QLK0	-
ENSRNOT00000047843.8	Itsn1-202	4884	1141aa	ENSRNOP00000045513.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QM65	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 5,112 bps, Translation length: 1,217 residues

Version

ENSRNOT00000042750.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000042750.7 Itsn1-201

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Transcript: ENSRNOT00000042750.7 Itsn1-201

Summary

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