Transcript: ENSRNOT00000039554.8 Mysm1-201

Description

myb-like, SWIRM and MPN domains 1 [Source:RGD Symbol;Acc:1311787]

Gene Synonyms

LOC298247, RGD1311787

Location

Primary_assembly 5: 114,889,269-114,942,385 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 26 domains and features, is associated with 301 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000026299.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000039554.8	Mysm1-201	2830	810aa	ENSRNOP00000030043.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7T9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000124137.1	Mysm1-204	3591	796aa	ENSRNOP00000112470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000119743.2	Mysm1-203	3066	803aa	ENSRNOP00000097255.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B5I6	-
ENSRNOT00000102038.2	Mysm1-202	2716	747aa	ENSRNOP00000089875.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9L8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 2,830 bps, Translation length: 810 residues

Version

ENSRNOT00000039554.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000039554.8 Mysm1-201

Summary

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Transcript: ENSRNOT00000039554.8 Mysm1-201

Summary

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