Transcript: ENSRNOT00000017102.8 Amph-201

Description

amphiphysin [Source:RGD Symbol;Acc:620274]

Gene Synonyms

Amph1, LOC100909679, LOC687233

Location

Primary_assembly 17: 50,435,018-50,678,478 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 44 domains and features, is associated with 1373 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000059510.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084702.3	Amph-203	3609	817aa	ENSRNOP00000070116.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JX32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000017102.8	Amph-201	3321	680aa	ENSRNOP00000017102.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPP0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000129058.1	Amph-204	3197	648aa	ENSRNOP00000111039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000080800.3	Amph-202	3126	656aa	ENSRNOP00000073615.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5Z4	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 3,321 bps, Translation length: 680 residues

Version

ENSRNOT00000017102.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000017102.8 Amph-201

Summary

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Transcript: ENSRNOT00000017102.8 Amph-201

Summary

About Us

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