Transcript: ENSRNOT00000089374.3 Kdm4b-202

Description

lysine demethylase 4B [Source:RGD Symbol;Acc:1588576]

Gene Synonyms

LOC301128

Location

About this transcript

This transcript has 22 exons, is annotated with 42 domains and features, is associated with 87 variant alleles and maps to 341 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000071199.4	Kdm4b-201	5341	1099aa	ENSRNOP00000066803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KQY4 M0RB75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000089374.3	Kdm4b-202	5212	1065aa	ENSRNOP00000070258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXG2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 5,212 bps, Translation length: 1,065 residues

Version

ENSRNOT00000089374.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.