Transcript: ENSRNOT00000055506.6 Tnfrsf9-201

Description

TNF receptor superfamily member 9 [Source:RGD Symbol;Acc:1598208]

Gene Synonyms

4-1BB, LOC500590, MGC114552

Location

About this transcript

This transcript has 8 exons, is annotated with 29 domains and features, is associated with 199 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055506.6	Tnfrsf9-201	1383	258aa	ENSRNOP00000052371.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9K3Y716 Q4V895	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000118543.2	Tnfrsf9-202	1072	213aa	ENSRNOP00000083115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWJ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,383 bps, Translation length: 258 residues

Version

ENSRNOT00000055506.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.