Transcript: ENSRNOT00000055013.6 Spn-201

Description

sialophorin [Source:RGD Symbol;Acc:3750]

Gene Synonyms

Cd43, Lsn, Lsn1, gpL115

Location

Primary_assembly 1: 191,178,096-191,181,246 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 18 domains and features, is associated with 40 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000036711.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000150721.1	Spn-203	1935	434aa	ENSRNOP00000100729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000055013.6	Spn-201	3151	392aa	ENSRNOP00000051894.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7 R9PXZ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100623.2	Spn-202	2909	392aa	ENSRNOP00000081397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7 R9PXZ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000157992.1	Spn-204	2764	392aa	ENSRNOP00000103347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I9L7	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 3,151 bps, Translation length: 392 residues

Version

ENSRNOT00000055013.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000055013.6 Spn-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000055013.6 Spn-201

Summary

About Us

Get help

Our sister sites

Follow us