Transcript: ENSRNOT00000034758.8 Slit1-201

Description

slit guidance ligand 1 [Source:RGD Symbol;Acc:69307]

Gene Synonyms

MEGF4, slit-1

Location

About this transcript

This transcript has 37 exons, is annotated with 163 domains and features, is associated with 634 variant alleles and maps to 315 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000034758.8	Slit1-201	4950	1531aa	ENSRNOP00000035315.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O88279-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000104612.2	Slit1-203	5512	1471aa	ENSRNOP00000083162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAF2	-
ENSRNOT00000111197.2	Slit1-204	5473	1458aa	ENSRNOP00000079283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O88279-3	-
ENSRNOT00000097459.2	Slit1-202	4833	1492aa	ENSRNOP00000084725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZX9	-

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 4,950 bps, Translation length: 1,531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88279

Version

ENSRNOT00000034758.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.