Transcript: ENSRNOT00000088104.3 Capn15-202

Description

calpain 15 [Source:RGD Symbol;Acc:1306514]

Gene Synonyms

LOC303000, Solh

Location

About this transcript

This transcript has 12 exons, is annotated with 62 domains and features, is associated with 92 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000088104.3	Capn15-202	4767	1188aa	ENSRNOP00000075502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000027430.8	Capn15-201	4815	1031aa	ENSRNOP00000027430.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HD81 D3ZJJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 4,767 bps, Translation length: 1,188 residues

Version

ENSRNOT00000088104.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.