Transcript: ENSRNOT00000046847.6 Smad2-203

Description

SMAD family member 2 [Source:RGD Symbol;Acc:3031]

Gene Synonyms

MGC156656, Madh2, SMAD 2

Location

Primary_assembly 18: 72,125,427-72,187,388 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 189 variant alleles and maps to 253 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018140.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110593.2	Smad2-207	2939	586aa	ENSRNOP00000080684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000092173.3	Smad2-205	2708	411aa	ENSRNOP00000075341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O70436	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000046847.6	Smad2-203	2663	467aa	ENSRNOP00000048329.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QQK5 A6KMS7	-
ENSRNOT00000089468.3	Smad2-204	2556	437aa	ENSRNOP00000071524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0P2 A6KMS9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000122336.1	Smad2-208	1506	423aa	ENSRNOP00000105745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000109129.2	Smad2-206	1417	431aa	ENSRNOP00000097880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASQ0	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,663 bps, Translation length: 467 residues

Version

ENSRNOT00000046847.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000046847.6 Smad2-203

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Transcript: ENSRNOT00000046847.6 Smad2-203

Summary

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