Transcript: ENSRNOT00000020272.9 Slc1a1-201

Description

solute carrier family 1 member 1 [Source:RGD Symbol;Acc:3696]

Gene Synonyms

Eaac1, Eaat3, REAAC1

Location

About this transcript

This transcript has 11 exons, is annotated with 41 domains and features, is associated with 422 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099702.2	Slc1a1-202	3720	523aa	ENSRNOP00000096736.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AVI3 A6I0U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000020272.9	Slc1a1-201	2104	492aa	ENSRNOP00000020272.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51907	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,104 bps, Translation length: 492 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51907

Version

ENSRNOT00000020272.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.