Transcript: ENSRNOT00000038336.8 Hmbox1-201

Description

homeobox containing 1 [Source:RGD Symbol;Acc:1306787]

Gene Synonyms

LOC305968, RGD1306787

Location

About this transcript

This transcript has 11 exons, is annotated with 21 domains and features, is associated with 302 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112734.2	Hmbox1-202	1866	447aa	ENSRNOP00000077167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5F7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000129024.1	Hmbox1-204	2673	444aa	ENSRNOP00000110153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173136.1	Hmbox1-205	2601	420aa	ENSRNOP00000105983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120015.2	Hmbox1-203	2550	403aa	ENSRNOP00000092747.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJY0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000038336.8	Hmbox1-201	1576	412aa	ENSRNOP00000029528.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZER1	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,576 bps, Translation length: 412 residues

Version

ENSRNOT00000038336.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 9, 10.