Transcript: ENSRNOT00000018116.8 Col9a1-201

Description

collagen type IX alpha 1 chain [Source:RGD Symbol;Acc:1309425]

Gene Synonyms

LOC305104

Location

About this transcript

This transcript has 38 exons, is annotated with 39 domains and features, is associated with 428 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018116.8	Col9a1-201	3804	934aa	ENSRNOP00000018116.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQ93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000150022.1	Col9a1-203	3832	927aa	ENSRNOP00000103106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000115769.2	Col9a1-202	3016	680aa	ENSRNOP00000081771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSW9	-

Summary

Statistics

Exons: 38, Coding exons: 38, Transcript length: 3,804 bps, Translation length: 934 residues

Version

ENSRNOT00000018116.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.