Transcript: ENSRNOT00000016712.7 Mtcl3-201

Description

MTCL family member 3 [Source:RGD Symbol;Acc:11479453]

Gene Synonyms

NEWGENE_1307525, Soga3

Location

Primary_assembly 1: 30,470,765-30,529,122 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 44 domains and features, is associated with 219 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000012324.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000146493.1	Mtcl3-204	4125	974aa	ENSRNOP00000100807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000107617.2	Mtcl3-202	3240	944aa	ENSRNOP00000086640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A680	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000016712.7	Mtcl3-201	3013	937aa	ENSRNOP00000016712.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A0A1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000140446.1	Mtcl3-203	2970	911aa	ENSRNOP00000103645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,013 bps, Translation length: 937 residues

Version

ENSRNOT00000016712.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000016712.7 Mtcl3-201

Summary

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Transcript: ENSRNOT00000016712.7 Mtcl3-201

Summary

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