Transcript: ENSRNOT00000016520.8 Samm50-201

Description

SAMM50 sorting and assembly machinery component [Source:RGD Symbol;Acc:1303219]

Gene Synonyms

MGC94439

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 138 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000158271.1	Samm50-204	4603	469aa	ENSRNOP00000105085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HTB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095544.2	Samm50-202	4528	444aa	ENSRNOP00000087763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9E2	-
ENSRNOT00000016520.8	Samm50-201	2513	456aa	ENSRNOP00000016520.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXV4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000098420.2	Samm50-203	1374	457aa	ENSRNOP00000096189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B3U3	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,513 bps, Translation length: 456 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6AXV4

Version

ENSRNOT00000016520.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.