Transcript: ENSRNOT00000066947.5 Eif3a-201

Description

eukaryotic translation initiation factor 3, subunit A [Source:RGD Symbol;Acc:1307269]

Gene Synonyms

Eif3s10, LOC292148, ZH12

Location

About this transcript

This transcript has 22 exons, is annotated with 34 domains and features, is associated with 35 variant alleles and maps to 295 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066947.5	Eif3a-201	5337	1383aa	ENSRNOP00000063484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JU68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000095164.2	Eif3a-202	5000	1340aa	ENSRNOP00000090156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8S5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,337 bps, Translation length: 1,383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1JU68

Version

ENSRNOT00000066947.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.