Transcript: ENSRNOT00000083488.3 Map3k9-202

Description

mitogen-activated protein kinase kinase kinase 9 [Source:RGD Symbol;Acc:1562149]

Gene Synonyms

LOC500690, RGD1562149

Location

About this transcript

This transcript has 11 exons, is annotated with 56 domains and features, is associated with 301 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009693.7	Map3k9-201	3707	1100aa	ENSRNOP00000009693.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000083488.3	Map3k9-202	3698	1097aa	ENSRNOP00000069168.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUN9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,698 bps, Translation length: 1,097 residues

Version

ENSRNOT00000083488.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.